Senior Program Manager, Air Vehicle Integration
Operations
Boston, MA, USA
Posted on Jun 22, 2026
About Merlin:
Merlin is a venture backed aerospace startup building a non-human pilot to enable both reduced crew and uncrewed flight. Backed by some of the world’s leading investors, Merlin is scaling alongside our customers to begin leveraging autonomy today to solve some of aviation’s biggest challenges.
About You:
You are a program owner - you own your work and do not pass the baton - your programs are your responsibility for success. You're a strategic operator with deep program leadership in aerospace, autonomy, or safety-critical systems, and you're equally comfortable in an STC review, a hardware integration bench, and a customer program review.
You bring technical fluency (you don't need to be the engineer, but you talk to one credibly), certification literacy, and the operational rigor to keep a multi-aircraft integration portfolio on baseline. You thrive amid ambiguity and high execution velocity, and you build trust with operators, primes, and certification authorities alike.
Responsibilities:
- Own integration program execution for assigned airframes end to end — desktop, SITL, bench, and on-aircraft — translating mission and platform requirements into clear deployment and execution plans.
- Lead the functional team, setting program strategy, milestones, and priorities while the TPMs own day-to-day technical delivery; hold engineering, hardware, and functional managers accountable to schedule and scope.
- Own the airworthiness and certification path in partnership with the Certification Program Management team.
- Drive Stages of Involvement (SOIs), DO-160 environmental qualification, and system-safety artifacts (ARP4761A / MIL-STD-882E), keeping the certification IMS credible and on track.
- Manage hardware and subcontractor integration so that long-lead hardware availability is planned, not discovered. Treat supply/demand as a primary schedule driver.
- Own schedule and financial baselines - build and maintain integrated master schedules, WBS, financial plans, and program baselines across workstreams; feed the master supply-and-program model and program dashboards.
- Serve as the senior program point of contact for government customers, partners, and certification authorities — running program reviews, milestone gates, and status reporting with high accountability.
- Plan and shepherd flight test in coordination with the Flight Test lead connecting test outcomes back to certification and fielding milestones.
- Identify and mitigate cross-program risk before they hit delivery.
- Contribute to capture and new opportunity shaping alongside Business Development and technical leads, informing proposals with realistic integration, cost, and schedule inputs.
- Scale the operating model: tighten and extend the existing program rhythms, WBS frameworks, and reporting artifacts as the portfolio and team grow, and mentor across the program management organization.
Qualifications:
- 10+ years in program or project leadership, ideally in aerospace, autonomy, defense, or safety-critical dual-use systems.
- Proven success leading complex programs that combine physical aircraft integration with software/autonomy across cross-functional teams.
- Direct experience with aircraft airworthiness and certification
- Experience managing hardware integration and subcontractors/suppliers as schedule drivers, not just software workstreams.
- Strong command of the full program lifecycle from capture to fielding, including contract structures, CDRLs, SOWs, IMS/WBS, and earned-value metrics.
- Proven ability to lead a cross functional team and ability to context-switch across strategy, execution, and team dynamics over multiple efforts.
- Fluency with program tooling: Jira, requirements management (e.g., Jama), and IMS/scheduling tools.
- Strong systems thinking and technical curiosity; exceptional listening, communication, and stakeholder-alignment skills.
- Ability to obtain and maintain a U.S. Secret security clearance.
- Willingness to travel and work onsite at integration, flight-test, and partner locations as programs require.
Nice to Have:
- Active U.S. Secret (or higher) clearance.
- Experience integrating autonomy, mission systems, or flight-control systems onto crewed or uncrewed aircraft.
- Familiarity with government acquisition and test pathways (DoD 5000 series, AFWERX, DIU, SOF/SOCOM).
- Experience scaling program teams or standing up new operating models in high-growth environments.
This position is based on-site at Merlin HQ in Boston, MA.
Once you’re here, you’ll enjoy a variety of on-site perks designed to make your workday enjoyable and convenient. These include catered lunches featuring a rotating menu of delicious options, an assortment of snacks to keep you fueled throughout the day, and a selection of beverages, including coffee, tea, and other drinks, to keep you refreshed.
Our goal is to create an environment where you can thrive both professionally and personally
Merlin Labs offers an innovative, entrepreneurial, and team-focused startup environment. We also offer a top-notch benefits package (health, dental, life, unlimited vacation, and 401k with match) and work/life integration. Being part of the Merlin team allows you to become part of a small team that supports professional development while working together to achieve our mission.
Merlin Labs is an equal opportunity employer and values diversity. We do not discriminate on the basis of race, religion, color, national origin, genetic information, sex (including pregnancy), gender, gender identity and expression, sexual orientation, age, marital status, military service or obligation or disability status, or any other characteristic protected by law. All job offers are contingent upon the candidate passing background and reference checks.
At this time, we are unable to provide visa sponsorship or consider candidates who require visa transfers. Applicants must be authorized to work in the United States without the need for visa sponsorship now or in the future.
In compliance with federal law, all persons hired will be required to verify identity and eligibility to work in the United States and to complete the required employment eligibility verification form upon hire.
If you require reasonable accommodation in completing an application, interviewing, completing any pre-employment testing, or otherwise participating in the employee selection process, please direct your inquiries to: people@merlinlabs.com
Merlin Labs does not accept unsolicited resumes from any source other than directly from candidates.
165000 - 220000 USD a year
The compensation range provided is a good-faith estimate based on a wide range of factors, inclusive of base salary only. The actual offer will be determined by a variety of factors including the candidate's qualifications, skills, experience, education, and training. Highly competitive equity grants are considered part of Merlin's total compensation package. Additionally, Merlin offers top-tier benefits for full-time employees.